Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NCKAP1Q9Y2A7 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AL138709.1-201ENST00000614840 1693 ntBASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 RPL13AP20-201ENST00000459725 609 ntBASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AC091271.1-201ENST00000611877 1162 ntBASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.42■□□□□ 0.06
NCKAP1Q9Y2A7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 AC084364.1-201ENST00000551967 1556 ntBASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 MIR1202-201ENST00000408529 83 ntBASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CD8B2-202ENST00000417670 633 ntBASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 RN7SL48P-201ENST00000579283 293 ntBASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 AL603832.2-201ENST00000566195 2125 ntBASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NCKAP1Q9Y2A7 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 AC127383.1-201ENST00000444697 1800 ntBASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 AC007326.2-201ENST00000624224 7579 ntBASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NCKAP1Q9Y2A7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms