Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 RN7SL48P-201ENST00000579283 293 ntBASIC16.2■□□□□ 0.18
CDH9Q9ULB4 RHOXF1P1-202ENST00000635473 501 ntBASIC16.2■□□□□ 0.18
CDH9Q9ULB4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH9Q9ULB4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 EIF3FP3-201ENST00000434851 1086 ntBASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 FO681548.1-201ENST00000455617 1132 ntBASIC16.19■□□□□ 0.18
CDH9Q9ULB4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AC079316.1-201ENST00000548397 411 ntBASIC16.19■□□□□ 0.18
CDH9Q9ULB4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CDH9Q9ULB4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 REXO1L5P-201ENST00000622260 2098 ntBASIC16.18■□□□□ 0.18
CDH9Q9ULB4 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 AC023024.2-201ENST00000623561 1993 ntBASIC16.18■□□□□ 0.18
CDH9Q9ULB4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CDH9Q9ULB4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms