Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 AC253536.4-201ENST00000440539 267 ntBASIC20.76■□□□□ 0.91
USP35Q9P2H5 APOA2-204ENST00000464492 530 ntTSL 3 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 AC245884.6-201ENST00000515672 1067 ntBASIC20.76■□□□□ 0.91
USP35Q9P2H5 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 AC015910.1-201ENST00000579400 975 ntBASIC20.76■□□□□ 0.91
USP35Q9P2H5 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 AL354989.2-201ENST00000435838 1540 ntBASIC20.76■□□□□ 0.91
USP35Q9P2H5 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.76■□□□□ 0.91
USP35Q9P2H5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP35Q9P2H5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 AC104457.1-201ENST00000401024 814 ntBASIC20.75■□□□□ 0.91
USP35Q9P2H5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 MBP-227ENST00000526111 581 ntTSL 4 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 AC097359.3-201ENST00000603982 1210 ntBASIC20.75■□□□□ 0.91
USP35Q9P2H5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 FER1L4-210ENST00000615531 5998 ntBASIC20.75■□□□□ 0.91
USP35Q9P2H5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
USP35Q9P2H5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP35Q9P2H5 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 MIR33B-201ENST00000385104 96 ntBASIC20.74■□□□□ 0.91
USP35Q9P2H5 HLA-DQB2-229ENST00000411527 1059 ntBASIC20.74■□□□□ 0.91
USP35Q9P2H5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 TMEM198B-204ENST00000484016 896 ntBASIC20.74■□□□□ 0.91
USP35Q9P2H5 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 MTHFR-217ENST00000641820 1569 ntBASIC20.74■□□□□ 0.91
USP35Q9P2H5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP35Q9P2H5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.74■□□□□ 0.91
USP35Q9P2H5 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms