Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 AC084364.1-201ENST00000551967 1556 ntBASIC14.15□□□□□ -0.14
LRFN1Q9P244 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.15□□□□□ -0.14
LRFN1Q9P244 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 FO681548.1-201ENST00000455617 1132 ntBASIC14.15□□□□□ -0.14
LRFN1Q9P244 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 AP000812.2-201ENST00000538934 718 ntBASIC14.15□□□□□ -0.14
LRFN1Q9P244 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.15□□□□□ -0.14
LRFN1Q9P244 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LRFN1Q9P244 KRT8P35-201ENST00000483942 1338 ntBASIC14.15□□□□□ -0.15
LRFN1Q9P244 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CICP13-201ENST00000422015 2789 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 NUS1P3-201ENST00000423502 862 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CSF2RBP1-201ENST00000447905 391 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AC079316.1-201ENST00000548397 411 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AC244669.2-201ENST00000612320 853 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AL033527.4-201ENST00000641026 673 ntBASIC14.14□□□□□ -0.15
LRFN1Q9P244 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LRFN1Q9P244 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.14□□□□□ -0.15
LRFN1Q9P244 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
LRFN1Q9P244 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
LRFN1Q9P244 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms