Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 ST13P19-201ENST00000442505 1124 ntBASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 AC244197.1-201ENST00000456494 951 ntBASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 KRT8P1-201ENST00000557533 1207 ntBASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC180Q9P1Z9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 AL135901.1-201ENST00000451812 333 ntBASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 AC011471.3-201ENST00000623576 402 ntBASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
CCDC180Q9P1Z9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 ZNF436-AS1-201ENST00000335648 2547 ntBASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 HNRNPA1P27-201ENST00000412087 955 ntBASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 ACTBP7-201ENST00000418351 1124 ntBASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 AC002472.4-201ENST00000641915 272 ntBASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 BLK-205ENST00000529894 2017 ntTSL 5 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC30.27■■■□□ 2.44
CCDC180Q9P1Z9 CICP11-201ENST00000434745 2827 ntBASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 CELP-201ENST00000411440 1249 ntTSL 5 BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 AC106047.2-201ENST00000511723 743 ntBASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 RPS5-204ENST00000598098 536 ntTSL 2 BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
CCDC180Q9P1Z9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC180Q9P1Z9 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC180Q9P1Z9 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC180Q9P1Z9 AC105250.1-201ENST00000509378 2057 ntBASIC30.26■■■□□ 2.43
CCDC180Q9P1Z9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
CCDC180Q9P1Z9 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 AC092127.1-201ENST00000567093 3455 ntBASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 AL451007.2-201ENST00000632004 563 ntBASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 AC080080.1-201ENST00000625121 2420 ntBASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
CCDC180Q9P1Z9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 KRT17P4-201ENST00000429445 819 ntBASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC30.24■■■□□ 2.43
CCDC180Q9P1Z9 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC30.24■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms