Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC117500.6-201ENST00000624871 588 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 WASH3P-207ENST00000560956 1394 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 FO538757.1-201ENST00000623083 1397 ntBASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
SND1-IT1Q9HBX3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 REXO1L1P-202ENST00000608646 1974 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HNRNPDP1-201ENST00000439535 754 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 VN2R19P-201ENST00000442399 1052 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 FAM197Y8-203ENST00000450145 560 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 MIR4313-201ENST00000580760 101 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 TP73-AS1-207ENST00000624167 988 ntBASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SND1-IT1Q9HBX3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms