Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A4Q9HBG4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A4Q9HBG4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A4Q9HBG4 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP6V0A4Q9HBG4 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP6V0A4Q9HBG4 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 KLF2P4-201ENST00000451959 1225 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 BNIP3P42-201ENST00000454982 569 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 CTBP2P5-201ENST00000454986 1264 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 BNIP3P29-201ENST00000598302 571 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 AC011447.5-201ENST00000616168 564 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 PDIA3P1-201ENST00000471856 1510 ntBASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ATP6V0A4Q9HBG4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 BCRP2-202ENST00000447763 634 ntBASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 BCRP6-201ENST00000510112 632 ntBASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 BCRP7-201ENST00000511549 544 ntBASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 AC068587.3-201ENST00000526613 355 ntBASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 BX539320.1-201ENST00000623759 877 ntBASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ATP6V0A4Q9HBG4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.09■□□□□ 0.33
ATP6V0A4Q9HBG4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms