Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TMEM38AQ9H6F2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.32□□□□□ -0.12
TMEM38AQ9H6F2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TMEM38AQ9H6F2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 AP000347.1-202ENST00000435868 847 ntBASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 AC073592.8-201ENST00000624126 511 ntBASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TMEM38AQ9H6F2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CNN2P2-201ENST00000443536 909 ntBASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CNN2P3-201ENST00000450201 906 ntBASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 AL136317.3-201ENST00000618497 906 ntBASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 AC004461.2-201ENST00000629517 803 ntBASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM38AQ9H6F2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms