Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 AL360270.3-201ENST00000609118 1348 ntBASIC16.52■□□□□ 0.24
NXF3Q9H4D5 C18orf15-201ENST00000623680 2534 ntBASIC16.52■□□□□ 0.24
NXF3Q9H4D5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 AC245100.3-201ENST00000441281 285 ntBASIC16.52■□□□□ 0.24
NXF3Q9H4D5 AC022494.1-201ENST00000466044 728 ntBASIC16.52■□□□□ 0.24
NXF3Q9H4D5 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 MIR6869-201ENST00000619434 62 ntBASIC16.52■□□□□ 0.24
NXF3Q9H4D5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NXF3Q9H4D5 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NXF3Q9H4D5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NXF3Q9H4D5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.52■□□□□ 0.23
NXF3Q9H4D5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.52■□□□□ 0.23
NXF3Q9H4D5 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.52■□□□□ 0.23
NXF3Q9H4D5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 AC112693.3-201ENST00000624819 1983 ntBASIC16.51■□□□□ 0.23
NXF3Q9H4D5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 POM121L8P-201ENST00000417732 1281 ntBASIC16.51■□□□□ 0.23
NXF3Q9H4D5 POM121L9P-203ENST00000441984 1285 ntBASIC16.51■□□□□ 0.23
NXF3Q9H4D5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 AC004466.1-201ENST00000599515 1080 ntBASIC16.51■□□□□ 0.23
NXF3Q9H4D5 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
NXF3Q9H4D5 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 MIR326-201ENST00000362220 95 ntBASIC16.5■□□□□ 0.23
NXF3Q9H4D5 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AP006547.1-201ENST00000563435 692 ntBASIC16.5■□□□□ 0.23
NXF3Q9H4D5 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 SSR4P1-203ENST00000599569 2260 ntBASIC16.5■□□□□ 0.23
NXF3Q9H4D5 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NXF3Q9H4D5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms