Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 AC092978.1-202ENST00000637590 1327 ntBASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDH11XQ9BZA7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 CEP164P1-201ENST00000455142 418 ntBASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 NAP1L6-202ENST00000641404 1222 ntBASIC19.65■□□□□ 0.74
PCDH11XQ9BZA7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH11XQ9BZA7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.64■□□□□ 0.74
PCDH11XQ9BZA7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PCDH11XQ9BZA7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDH11XQ9BZA7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.64■□□□□ 0.74
PCDH11XQ9BZA7 AC105250.1-201ENST00000509378 2057 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AC069218.1-201ENST00000435269 762 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AC008267.1-201ENST00000474858 1069 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AC242376.1-201ENST00000559033 726 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 MIR7845-201ENST00000618396 99 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 CDK7-214ENST00000626796 358 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AL138725.1-201ENST00000407347 1314 ntBASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH11XQ9BZA7 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AC244394.1-201ENST00000435000 1665 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AC012441.2-201ENST00000444843 739 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 RTN3P1-201ENST00000536295 711 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AC012508.2-201ENST00000567613 1472 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 MIR4754-201ENST00000582477 89 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AC008825.2-201ENST00000603374 718 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AC012044.1-201ENST00000603431 297 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AL008718.2-201ENST00000609206 1313 ntBASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH11XQ9BZA7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms