Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 AL590560.3-201ENST00000623350 461 ntBASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 LINC00528-201ENST00000600723 2160 ntBASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
YIPF4Q9BSR8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC236430.1-201ENST00000402231 743 ntBASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC087499.5-201ENST00000452760 1342 ntBASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
YIPF4Q9BSR8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 AC015922.1-201ENST00000421102 1152 ntBASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 RPL13P2-201ENST00000440687 659 ntBASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.55□□□□□ -0.08
YIPF4Q9BSR8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms