Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
PCGF1Q9BSM1 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 PPT1-215ENST00000641471 2368 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 PHKG1P2-201ENST00000457537 863 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 LINC01115-203ENST00000606068 577 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AC008494.3-201ENST00000606615 944 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AC063926.2-201ENST00000623766 1308 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 SLC7A15P-201ENST00000424028 1363 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 AC023157.3-201ENST00000619086 2088 ntBASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.01□□□□□ -0.33
PCGF1Q9BSM1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13□□□□□ -0.33
PCGF1Q9BSM1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 EEF1DP4-201ENST00000446006 880 ntBASIC13□□□□□ -0.33
PCGF1Q9BSM1 NME4-207ENST00000450036 985 ntTSL 3 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 MEIS3P1-201ENST00000495167 958 ntBASIC13□□□□□ -0.33
PCGF1Q9BSM1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13□□□□□ -0.33
PCGF1Q9BSM1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms