Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.68■□□□□ 0.42
ARID3AQ99856 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.68■□□□□ 0.42
ARID3AQ99856 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC17.68■□□□□ 0.42
ARID3AQ99856 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARID3AQ99856 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC17.68■□□□□ 0.42
ARID3AQ99856 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.67■□□□□ 0.42
ARID3AQ99856 HTR5BP-201ENST00000430851 1154 ntBASIC17.67■□□□□ 0.42
ARID3AQ99856 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.67■□□□□ 0.42
ARID3AQ99856 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.67■□□□□ 0.42
ARID3AQ99856 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.67■□□□□ 0.42
ARID3AQ99856 RARRES2P8-201ENST00000566335 367 ntBASIC17.67■□□□□ 0.42
ARID3AQ99856 MTDHP5-201ENST00000598980 586 ntBASIC17.67■□□□□ 0.42
ARID3AQ99856 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 AJ011931.1-201ENST00000618749 2492 ntBASIC17.67■□□□□ 0.42
ARID3AQ99856 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 TNN-202ENST00000621086 4234 ntTSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
ARID3AQ99856 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARID3AQ99856 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARID3AQ99856 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
ARID3AQ99856 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC17.66■□□□□ 0.42
ARID3AQ99856 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ARID3AQ99856 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC17.66■□□□□ 0.42
ARID3AQ99856 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC17.66■□□□□ 0.42
ARID3AQ99856 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.66■□□□□ 0.42
ARID3AQ99856 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
ARID3AQ99856 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.66■□□□□ 0.42
ARID3AQ99856 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ARID3AQ99856 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.66■□□□□ 0.42
ARID3AQ99856 GPX1P2-201ENST00000429271 606 ntBASIC17.66■□□□□ 0.42
ARID3AQ99856 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.66■□□□□ 0.42
ARID3AQ99856 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ARID3AQ99856 KRT18P34-201ENST00000488218 1270 ntBASIC17.66■□□□□ 0.42
ARID3AQ99856 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.66■□□□□ 0.42
ARID3AQ99856 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms