Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.91□□□□□ -0.34
CCL13Q99616 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.91□□□□□ -0.34
CCL13Q99616 AL359711.2-201ENST00000563105 872 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 LINC02084-201ENST00000606069 1096 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 AC107373.2-201ENST00000607735 490 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CCL13Q99616 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 AC144831.1-201ENST00000573312 2656 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.91□□□□□ -0.34
CCL13Q99616 OR2I1P-209ENST00000641730 5365 ntBASIC12.91□□□□□ -0.34
CCL13Q99616 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CCL13Q99616 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 DBET-201ENST00000630918 3363 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 MST1L-201ENST00000442552 2185 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 C1QBPP1-201ENST00000400117 770 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 AL035633.1-201ENST00000406139 838 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 AL442647.2-201ENST00000429864 857 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 TAF8-206ENST00000472818 719 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC12.9□□□□□ -0.34
CCL13Q99616 AC026410.3-201ENST00000514280 936 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 AL109954.1-202ENST00000564051 2148 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 AC120045.2-201ENST00000567334 178 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 AC133539.2-201ENST00000604757 467 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 WFDC1-204ENST00000613603 549 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.9□□□□□ -0.34
CCL13Q99616 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 AC025048.6-201ENST00000634326 1161 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.9□□□□□ -0.34
CCL13Q99616 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 AC126177.1-201ENST00000547829 2218 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 KRT8P44-201ENST00000441609 1350 ntBASIC12.9□□□□□ -0.34
CCL13Q99616 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CCL13Q99616 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CCL13Q99616 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms