Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 CTBP2P5-201ENST00000454986 1264 ntBASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 FO681548.1-201ENST00000455617 1132 ntBASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 KRT90P-201ENST00000549264 1064 ntBASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 GNRHR2-203ENST00000581100 1187 ntBASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 RPS24-214ENST00000613865 538 ntTSL 5 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDK5RAP1Q96SZ6 AC067930.6-201ENST00000623257 4947 ntBASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 RHOXF1P1-202ENST00000635473 501 ntBASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 AC126365.1-201ENST00000578585 1514 ntBASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.93■□□□□ 0.14
CDK5RAP1Q96SZ6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.92■□□□□ 0.14
CDK5RAP1Q96SZ6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms