Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC002347.1-201ENST00000569543 541 ntBASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC091812.2-201ENST00000619081 385 ntBASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PMS2P7-201ENST00000506558 1336 ntBASIC13.09□□□□□ -0.31
CLCC1Q96S66 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CLCC1Q96S66 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CLCC1Q96S66 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLCC1Q96S66 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLCC1Q96S66 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CLCC1Q96S66 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.08□□□□□ -0.31
CLCC1Q96S66 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 AL671277.1-201ENST00000429656 993 ntBASIC13.08□□□□□ -0.32
CLCC1Q96S66 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 AL365330.1-201ENST00000607459 531 ntBASIC13.08□□□□□ -0.32
CLCC1Q96S66 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
CLCC1Q96S66 REXO1L2P-201ENST00000425429 2069 ntBASIC13.08□□□□□ -0.32
CLCC1Q96S66 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CLCC1Q96S66 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 AC073439.1-201ENST00000624121 1774 ntBASIC13.07□□□□□ -0.32
CLCC1Q96S66 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.07□□□□□ -0.32
CLCC1Q96S66 COL6A4P2-202ENST00000504443 2753 ntBASIC13.07□□□□□ -0.32
CLCC1Q96S66 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CLCC1Q96S66 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms