Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 KRT17P7-201ENST00000451704 1104 ntBASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 CR383656.12-201ENST00000549567 513 ntBASIC13.86□□□□□ -0.19
CPNE4Q96A23 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AL359711.2-201ENST00000563105 872 ntBASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC124283.3-201ENST00000570869 594 ntBASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 TMBIM7P-203ENST00000641617 1718 ntBASIC13.86□□□□□ -0.19
CPNE4Q96A23 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CPNE4Q96A23 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
CPNE4Q96A23 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 COX5BP8-201ENST00000416911 349 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 NME2P1-201ENST00000426182 414 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 GAPDHP40-201ENST00000505218 1006 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CU634019.7-201ENST00000624153 1185 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 FP236241.2-201ENST00000624906 1185 ntBASIC13.85□□□□□ -0.19
CPNE4Q96A23 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CPNE4Q96A23 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CPNE4Q96A23 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms