Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 PHKG1P2-201ENST00000457537 863 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.62□□□□□ -0.23
AP3S1Q92572 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 AC136632.2-201ENST00000512891 861 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 IGHV3-65-201ENST00000523210 341 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 SART3-203ENST00000546611 1184 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.62□□□□□ -0.23
AP3S1Q92572 AL355877.3-201ENST00000622820 899 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
AP3S1Q92572 AC084364.1-201ENST00000551967 1556 ntBASIC13.62□□□□□ -0.23
AP3S1Q92572 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.62□□□□□ -0.23
AP3S1Q92572 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
AP3S1Q92572 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.61□□□□□ -0.23
AP3S1Q92572 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 AC104076.2-201ENST00000448912 469 ntBASIC13.61□□□□□ -0.23
AP3S1Q92572 TPT1P11-201ENST00000458482 498 ntBASIC13.61□□□□□ -0.23
AP3S1Q92572 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.61□□□□□ -0.23
AP3S1Q92572 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 RBM42-202ENST00000586618 771 ntTSL 3 BASIC13.61□□□□□ -0.23
AP3S1Q92572 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.61□□□□□ -0.23
AP3S1Q92572 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.61□□□□□ -0.23
AP3S1Q92572 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.61□□□□□ -0.23
AP3S1Q92572 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
AP3S1Q92572 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
AP3S1Q92572 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms