Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAF3IP1Q8TDR0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 AC097493.3-201ENST00000509725 367 ntBASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 AC044860.1-202ENST00000559481 777 ntBASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 AC100757.3-201ENST00000622361 1406 ntBASIC16.11■□□□□ 0.17
TRAF3IP1Q8TDR0 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC092580.3-201ENST00000430932 139 ntBASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 TIMM17BP1-201ENST00000545713 516 ntBASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 WASH3P-207ENST00000560956 1394 ntBASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAF3IP1Q8TDR0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.09■□□□□ 0.17
TRAF3IP1Q8TDR0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms