Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AP002414.4-201ENST00000589764 1148 ntBASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 MTDHP4-201ENST00000600287 670 ntBASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AC069148.1-201ENST00000608741 768 ntBASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 AC073439.1-201ENST00000624121 1774 ntBASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
SMIM11BQ8TCY0 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 KRT18P31-201ENST00000506277 1292 ntBASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 AL450472.2-201ENST00000603663 1156 ntBASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SMIM11BQ8TCY0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC10.04□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms