Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CICP12-201ENST00000455801 843 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AP005264.6-204ENST00000588436 719 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 HLA-DMA-203ENST00000395305 777 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 AC003686.1-201ENST00000550956 1034 ntBASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
ALMS1Q8TCU4 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 MTHFR-217ENST00000641820 1569 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ALG3P1-201ENST00000508806 1114 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 MBP-238ENST00000580402 915 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ZNF436-AS1-201ENST00000335648 2547 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 AC131206.1-201ENST00000538078 1211 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PTPN20CP-201ENST00000614090 920 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 CHCHD2P2-201ENST00000503744 321 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 AC027601.3-201ENST00000622907 509 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 HELLS-212ENST00000630929 400 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 AC092299.1-201ENST00000632679 757 ntBASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC10.03□□□□□ -0.8
ALMS1Q8TCU4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
ALMS1Q8TCU4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms