Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 LILRP1-201ENST00000444199 1370 ntBASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 AC010141.1-201ENST00000411585 623 ntBASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 AL139008.1-201ENST00000437894 228 ntBASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 RN7SL67P-201ENST00000492147 296 ntBASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 RBM8B-201ENST00000555532 525 ntBASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CFAP43Q8NDM7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 AC136621.1-201ENST00000624017 2304 ntBASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 DNM1P30-201ENST00000563586 452 ntBASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CFAP43Q8NDM7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CFAP43Q8NDM7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 AC023090.2-201ENST00000625182 2110 ntBASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 AC003102.2-201ENST00000589195 1469 ntBASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CFAP43Q8NDM7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 RN7SL163P-201ENST00000583100 276 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MEG3_2.1-201ENST00000611456 105 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 CYP51A1P3-201ENST00000400072 1428 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 SSR4P1-203ENST00000599569 2260 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MIR3677-201ENST00000578964 60 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MIR4649-201ENST00000582839 64 ntBASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CFAP43Q8NDM7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC23.43■■□□□ 1.34
CFAP43Q8NDM7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms