Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
C9orf40Q8IXQ3 AL360270.3-201ENST00000609118 1348 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 KRT8P14-201ENST00000414254 1442 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 REXO1L5P-201ENST00000622260 2098 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AC005229.1-201ENST00000392885 409 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 ACTBP8-201ENST00000403258 1108 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AL355864.2-201ENST00000447420 863 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 BCRP2-202ENST00000447763 634 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 BCRP6-201ENST00000510112 632 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 BCRP7-201ENST00000511549 544 ntBASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
C9orf40Q8IXQ3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 KRT17P8-201ENST00000540749 863 ntBASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AC106886.1-201ENST00000568660 600 ntBASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AL022328.1-201ENST00000610050 478 ntBASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 AL162274.1-201ENST00000617191 1098 ntBASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
C9orf40Q8IXQ3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms