Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SMARCD3Q6STE5 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AL035456.1-201ENST00000456064 1369 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AL627223.1-201ENST00000416693 442 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 RN7SL828P-201ENST00000607615 303 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AC007967.4-201ENST00000614700 386 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AL513210.1-201ENST00000629608 234 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SMARCD3Q6STE5 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 KRT8P12-202ENST00000472924 1397 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AL022342.1-201ENST00000400363 863 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 GRK6P1-201ENST00000400595 1711 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 TARDBPP1-201ENST00000442013 1203 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 DNAJB3-201ENST00000446806 729 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AL133215.2-201ENST00000609242 977 ntBASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SMARCD3Q6STE5 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms