Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 TMEM198B-204ENST00000484016 896 ntBASIC14.1□□□□□ -0.15
RBM48Q5RL73 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.1□□□□□ -0.15
RBM48Q5RL73 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RBM48Q5RL73 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 AL591122.2-201ENST00000624125 1853 ntBASIC14.1□□□□□ -0.15
RBM48Q5RL73 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RBM48Q5RL73 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 AC130686.1-201ENST00000622936 2466 ntBASIC14.09□□□□□ -0.15
RBM48Q5RL73 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KRT18P21-201ENST00000515767 1272 ntBASIC14.09□□□□□ -0.15
RBM48Q5RL73 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 AC012508.2-201ENST00000567613 1472 ntBASIC14.09□□□□□ -0.15
RBM48Q5RL73 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RBM48Q5RL73 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 KRT8P24-201ENST00000560290 1559 ntBASIC14.09□□□□□ -0.15
RBM48Q5RL73 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RBM48Q5RL73 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
RBM48Q5RL73 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
RBM48Q5RL73 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
RBM48Q5RL73 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
RBM48Q5RL73 KRT8P22-201ENST00000562317 1415 ntBASIC14.08□□□□□ -0.15
RBM48Q5RL73 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RBM48Q5RL73 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.08□□□□□ -0.16
RBM48Q5RL73 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 AC098859.1-201ENST00000502915 1238 ntBASIC14.08□□□□□ -0.16
RBM48Q5RL73 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.08□□□□□ -0.16
RBM48Q5RL73 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms