Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 BX284668.4-201ENST00000453917 508 ntBASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 RHOQP1-201ENST00000555758 579 ntBASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.79■□□□□ 0.44
SHROOM1Q2M3G4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 AC020910.5-201ENST00000623668 1865 ntBASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 AC136621.1-201ENST00000624017 2304 ntBASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.78■□□□□ 0.44
SHROOM1Q2M3G4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AC091804.1-201ENST00000486888 567 ntBASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHROOM1Q2M3G4 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.77■□□□□ 0.43
SHROOM1Q2M3G4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.76■□□□□ 0.43
SHROOM1Q2M3G4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms