Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AC138466.3-201ENST00000619983 221 ntBASIC16.66■□□□□ 0.26
CDC42EP1Q00587 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CDC42EP1Q00587 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 MIR326-201ENST00000362220 95 ntBASIC16.65■□□□□ 0.26
CDC42EP1Q00587 AC022494.1-201ENST00000466044 728 ntBASIC16.65■□□□□ 0.26
CDC42EP1Q00587 AC108725.1-201ENST00000495472 409 ntBASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDC42EP1Q00587 AC126365.1-201ENST00000578585 1514 ntBASIC16.65■□□□□ 0.26
CDC42EP1Q00587 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
CDC42EP1Q00587 REXO1L4P-201ENST00000605109 1937 ntBASIC16.64■□□□□ 0.26
CDC42EP1Q00587 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDC42EP1Q00587 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 LINC02199-201ENST00000506655 2702 ntBASIC16.64■□□□□ 0.25
CDC42EP1Q00587 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 MTX1P1-201ENST00000440904 838 ntBASIC16.64■□□□□ 0.25
CDC42EP1Q00587 AL591846.1-201ENST00000451736 433 ntBASIC16.64■□□□□ 0.25
CDC42EP1Q00587 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 ACR-203ENST00000529621 708 ntTSL 5 BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDC42EP1Q00587 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms