Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 AL031731.1-201ENST00000642131 2094 ntBASIC13.41□□□□□ -0.26
UBA52P62987 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.41□□□□□ -0.26
UBA52P62987 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
UBA52P62987 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
UBA52P62987 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 AP003680.1-201ENST00000598970 3660 ntBASIC13.41□□□□□ -0.26
UBA52P62987 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
UBA52P62987 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.4□□□□□ -0.26
UBA52P62987 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.4□□□□□ -0.26
UBA52P62987 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 RNU1-129P-201ENST00000384064 167 ntBASIC13.4□□□□□ -0.26
UBA52P62987 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
UBA52P62987 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.4□□□□□ -0.26
UBA52P62987 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 AC091167.2-201ENST00000579581 588 ntBASIC13.4□□□□□ -0.26
UBA52P62987 U1.21-201ENST00000580816 167 ntBASIC13.4□□□□□ -0.26
UBA52P62987 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.4□□□□□ -0.26
UBA52P62987 AC027307.3-201ENST00000594262 1100 ntBASIC13.4□□□□□ -0.26
UBA52P62987 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.4□□□□□ -0.26
UBA52P62987 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 AC148477.4-201ENST00000613430 1793 ntBASIC13.4□□□□□ -0.26
UBA52P62987 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
UBA52P62987 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
UBA52P62987 PCGF3-213ENST00000620529 1899 ntBASIC13.4□□□□□ -0.26
UBA52P62987 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
UBA52P62987 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBA52P62987 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBA52P62987 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.4□□□□□ -0.27
UBA52P62987 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
UBA52P62987 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.27
UBA52P62987 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
UBA52P62987 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.4□□□□□ -0.27
UBA52P62987 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
UBA52P62987 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.39□□□□□ -0.27
UBA52P62987 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC13.39□□□□□ -0.27
UBA52P62987 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
UBA52P62987 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms