Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIMK2P53671 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIMK2P53671 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LIMK2P53671 AC023908.3-201ENST00000564211 3047 ntBASIC15.56■□□□□ 0.08
LIMK2P53671 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIMK2P53671 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LIMK2P53671 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LIMK2P53671 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LIMK2P53671 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LIMK2P53671 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
LIMK2P53671 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
LIMK2P53671 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LIMK2P53671 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 AC087499.6-201ENST00000411576 835 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 AC074338.1-201ENST00000416825 156 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 GHSR-202ENST00000427970 912 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 AC114501.2-201ENST00000439631 535 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 DOC2GP-202ENST00000514950 1163 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 SDHAP3-202ENST00000515467 728 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
LIMK2P53671 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LIMK2P53671 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.55■□□□□ 0.08
LIMK2P53671 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
LIMK2P53671 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 LINC00552-201ENST00000625151 2579 ntBASIC15.55■□□□□ 0.08
LIMK2P53671 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.55■□□□□ 0.08
LIMK2P53671 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LIMK2P53671 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 SPDYE19P-201ENST00000338590 713 ntBASIC15.54■□□□□ 0.08
LIMK2P53671 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.54■□□□□ 0.08
LIMK2P53671 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 KRT17P7-201ENST00000451704 1104 ntBASIC15.54■□□□□ 0.08
LIMK2P53671 AC093004.1-201ENST00000508850 424 ntBASIC15.54■□□□□ 0.08
LIMK2P53671 SLED1-202ENST00000512051 380 ntBASIC15.54■□□□□ 0.08
LIMK2P53671 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.54■□□□□ 0.08
LIMK2P53671 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LIMK2P53671 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.54■□□□□ 0.08
LIMK2P53671 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.54■□□□□ 0.08
LIMK2P53671 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.54■□□□□ 0.08
LIMK2P53671 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms