Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.25■□□□□ 0.19
TUBP50607 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.25■□□□□ 0.19
TUBP50607 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TUBP50607 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBP50607 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TUBP50607 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.24■□□□□ 0.19
TUBP50607 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.24■□□□□ 0.19
TUBP50607 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 AC009486.1-201ENST00000569860 813 ntBASIC16.24■□□□□ 0.19
TUBP50607 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 BTNL10-201ENST00000595971 695 ntBASIC16.24■□□□□ 0.19
TUBP50607 AC233724.13-201ENST00000598383 410 ntBASIC16.24■□□□□ 0.19
TUBP50607 AL359881.2-201ENST00000602973 570 ntBASIC16.24■□□□□ 0.19
TUBP50607 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.24■□□□□ 0.19
TUBP50607 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.24■□□□□ 0.19
TUBP50607 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TUBP50607 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.24■□□□□ 0.19
TUBP50607 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.24■□□□□ 0.19
TUBP50607 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.23■□□□□ 0.19
TUBP50607 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.23■□□□□ 0.19
TUBP50607 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.23■□□□□ 0.19
TUBP50607 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 ATP5G2P4-201ENST00000442175 420 ntBASIC16.23■□□□□ 0.19
TUBP50607 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ACA64.2-201ENST00000459014 129 ntBASIC16.23■□□□□ 0.19
TUBP50607 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.23■□□□□ 0.19
TUBP50607 RAB43P1-201ENST00000561790 589 ntBASIC16.23■□□□□ 0.19
TUBP50607 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 AP001063.1-201ENST00000568332 529 ntBASIC16.23■□□□□ 0.19
TUBP50607 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.23■□□□□ 0.19
TUBP50607 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.23■□□□□ 0.19
TUBP50607 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TUBP50607 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms