Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CDC34P49427 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.25□□□□□ -0.45
CDC34P49427 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
CDC34P49427 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CDC34P49427 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 RPS2P1-201ENST00000434010 821 ntBASIC12.24□□□□□ -0.45
CDC34P49427 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.24□□□□□ -0.45
CDC34P49427 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.24□□□□□ -0.45
CDC34P49427 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.24□□□□□ -0.45
CDC34P49427 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.24□□□□□ -0.45
CDC34P49427 AL121772.3-201ENST00000610840 674 ntBASIC12.24□□□□□ -0.45
CDC34P49427 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.24□□□□□ -0.45
CDC34P49427 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 CICP11-201ENST00000434745 2827 ntBASIC12.24□□□□□ -0.45
CDC34P49427 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CDC34P49427 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CDC34P49427 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.23□□□□□ -0.45
CDC34P49427 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 AL731571.1-201ENST00000617058 5428 ntBASIC12.23□□□□□ -0.45
CDC34P49427 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC12.23□□□□□ -0.45
CDC34P49427 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.23□□□□□ -0.45
CDC34P49427 AC092474.2-201ENST00000424288 719 ntBASIC12.23□□□□□ -0.45
CDC34P49427 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 PHKG1P2-201ENST00000457537 863 ntBASIC12.23□□□□□ -0.45
CDC34P49427 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.23□□□□□ -0.45
CDC34P49427 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.23□□□□□ -0.45
CDC34P49427 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.23□□□□□ -0.45
CDC34P49427 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CDC34P49427 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms