Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 AL355334.1-201ENST00000417713 215 ntBASIC18.74■□□□□ 0.59
PDE6BP35913 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.74■□□□□ 0.59
PDE6BP35913 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 RN7SL181P-201ENST00000462921 277 ntBASIC18.74■□□□□ 0.59
PDE6BP35913 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC18.74■□□□□ 0.59
PDE6BP35913 RCC2P8-201ENST00000502779 1035 ntBASIC18.74■□□□□ 0.59
PDE6BP35913 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
PDE6BP35913 AC009779.1-201ENST00000551138 283 ntBASIC18.74■□□□□ 0.59
PDE6BP35913 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.74■□□□□ 0.59
PDE6BP35913 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDE6BP35913 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDE6BP35913 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 E2F3P2-201ENST00000447755 1422 ntBASIC18.74■□□□□ 0.59
PDE6BP35913 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDE6BP35913 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6BP35913 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6BP35913 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6BP35913 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDE6BP35913 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 HLA-J-204ENST00000495278 958 ntBASIC18.73■□□□□ 0.59
PDE6BP35913 PGAM1P5-201ENST00000548011 764 ntBASIC18.73■□□□□ 0.59
PDE6BP35913 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC18.73■□□□□ 0.59
PDE6BP35913 MIR4754-201ENST00000582477 89 ntBASIC18.73■□□□□ 0.59
PDE6BP35913 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDE6BP35913 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PDE6BP35913 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDE6BP35913 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.73■□□□□ 0.59
PDE6BP35913 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.73■□□□□ 0.59
PDE6BP35913 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 RBM38-204ENST00000371219 760 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDE6BP35913 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 RN7SL818P-201ENST00000485099 259 ntBASIC18.72■□□□□ 0.59
PDE6BP35913 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
PDE6BP35913 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.72■□□□□ 0.59
PDE6BP35913 NPM1P43-201ENST00000558669 786 ntBASIC18.72■□□□□ 0.59
PDE6BP35913 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDE6BP35913 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC18.72■□□□□ 0.59
PDE6BP35913 RN7SL725P-201ENST00000606439 259 ntBASIC18.72■□□□□ 0.59
PDE6BP35913 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.72■□□□□ 0.59
PDE6BP35913 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms