Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.28■□□□□ 0.2
CHKAP35790 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.28■□□□□ 0.2
CHKAP35790 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.28■□□□□ 0.2
CHKAP35790 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.28■□□□□ 0.2
CHKAP35790 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.28■□□□□ 0.2
CHKAP35790 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CHKAP35790 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CHKAP35790 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.28■□□□□ 0.2
CHKAP35790 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 LINC00552-201ENST00000625151 2579 ntBASIC16.28■□□□□ 0.2
CHKAP35790 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC16.28■□□□□ 0.2
CHKAP35790 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.28■□□□□ 0.2
CHKAP35790 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CHKAP35790 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CHKAP35790 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.27■□□□□ 0.2
CHKAP35790 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 AL607033.1-201ENST00000623900 1599 ntBASIC16.27■□□□□ 0.2
CHKAP35790 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 AL512384.1-201ENST00000406683 331 ntBASIC16.27■□□□□ 0.2
CHKAP35790 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CHKAP35790 AC098850.1-201ENST00000419919 790 ntBASIC16.27■□□□□ 0.2
CHKAP35790 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
CHKAP35790 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.27■□□□□ 0.2
CHKAP35790 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.27■□□□□ 0.2
CHKAP35790 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 INE1-201ENST00000456273 945 ntBASIC16.27■□□□□ 0.2
CHKAP35790 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.27■□□□□ 0.2
CHKAP35790 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.27■□□□□ 0.2
CHKAP35790 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CHKAP35790 AC092552.1-201ENST00000547243 906 ntBASIC16.27■□□□□ 0.2
CHKAP35790 CTBP2P3-201ENST00000585629 1255 ntBASIC16.27■□□□□ 0.2
CHKAP35790 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CHKAP35790 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
CHKAP35790 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.27■□□□□ 0.19
CHKAP35790 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CHKAP35790 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.19
CHKAP35790 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CHKAP35790 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.27■□□□□ 0.19
CHKAP35790 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CHKAP35790 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CHKAP35790 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 AC126365.1-201ENST00000578585 1514 ntBASIC16.26■□□□□ 0.19
CHKAP35790 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
CHKAP35790 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.26■□□□□ 0.19
CHKAP35790 AL442647.2-201ENST00000429864 857 ntBASIC16.26■□□□□ 0.19
CHKAP35790 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.26■□□□□ 0.19
CHKAP35790 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 GIMAP3P-201ENST00000495150 836 ntBASIC16.26■□□□□ 0.19
CHKAP35790 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.26■□□□□ 0.19
CHKAP35790 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.26■□□□□ 0.19
CHKAP35790 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.26■□□□□ 0.19
CHKAP35790 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 MIR8072-201ENST00000614241 80 ntBASIC16.26■□□□□ 0.19
CHKAP35790 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms