Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN1P35523 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLCN1P35523 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN1P35523 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLCN1P35523 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLCN1P35523 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 OS9-206ENST00000435406 2346 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.59■□□□□ 0.41
CLCN1P35523 AL591424.1-201ENST00000442569 1213 ntBASIC17.59■□□□□ 0.41
CLCN1P35523 KRT18P3-201ENST00000451602 1288 ntBASIC17.59■□□□□ 0.41
CLCN1P35523 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.59■□□□□ 0.41
CLCN1P35523 AP002472.1-201ENST00000577490 586 ntBASIC17.59■□□□□ 0.41
CLCN1P35523 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.59■□□□□ 0.41
CLCN1P35523 AL078644.1-201ENST00000609881 752 ntBASIC17.59■□□□□ 0.41
CLCN1P35523 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CLCN1P35523 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC17.59■□□□□ 0.41
CLCN1P35523 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
CLCN1P35523 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLCN1P35523 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCN1P35523 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
CLCN1P35523 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCN1P35523 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC17.58■□□□□ 0.41
CLCN1P35523 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLCN1P35523 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCN1P35523 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCN1P35523 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 MED15P5-201ENST00000423150 992 ntBASIC17.58■□□□□ 0.4
CLCN1P35523 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.58■□□□□ 0.4
CLCN1P35523 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.58■□□□□ 0.4
CLCN1P35523 RNA5SP416-201ENST00000516838 111 ntBASIC17.58■□□□□ 0.4
CLCN1P35523 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.58■□□□□ 0.4
CLCN1P35523 Z99916.3-201ENST00000623422 1080 ntBASIC17.58■□□□□ 0.4
CLCN1P35523 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.58■□□□□ 0.4
CLCN1P35523 OR2I1P-209ENST00000641730 5365 ntBASIC17.58■□□□□ 0.4
CLCN1P35523 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CLCN1P35523 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLCN1P35523 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.58■□□□□ 0.4
CLCN1P35523 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CLCN1P35523 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CLCN1P35523 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLCN1P35523 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms