Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
THBS4P35443 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.59□□□□□ -0.23
THBS4P35443 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.59□□□□□ -0.23
THBS4P35443 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.59□□□□□ -0.23
THBS4P35443 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.59□□□□□ -0.23
THBS4P35443 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.59□□□□□ -0.23
THBS4P35443 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.59□□□□□ -0.23
THBS4P35443 AL161772.1-201ENST00000610494 4412 ntBASIC13.59□□□□□ -0.23
THBS4P35443 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.59□□□□□ -0.23
THBS4P35443 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.59□□□□□ -0.23
THBS4P35443 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
THBS4P35443 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
THBS4P35443 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.58□□□□□ -0.23
THBS4P35443 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
THBS4P35443 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
THBS4P35443 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
THBS4P35443 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
THBS4P35443 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.58□□□□□ -0.24
THBS4P35443 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
THBS4P35443 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.58□□□□□ -0.24
THBS4P35443 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 KRT18P64-201ENST00000434946 1219 ntBASIC13.58□□□□□ -0.24
THBS4P35443 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.58□□□□□ -0.24
THBS4P35443 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.58□□□□□ -0.24
THBS4P35443 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
THBS4P35443 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
THBS4P35443 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 LINC01101-201ENST00000622953 1884 ntBASIC13.58□□□□□ -0.24
THBS4P35443 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.58□□□□□ -0.24
THBS4P35443 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.58□□□□□ -0.24
THBS4P35443 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.58□□□□□ -0.24
THBS4P35443 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
THBS4P35443 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms