Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC20.38■□□□□ 0.85
USP6P35125 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.38■□□□□ 0.85
USP6P35125 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USP6P35125 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
USP6P35125 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
USP6P35125 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC20.37■□□□□ 0.85
USP6P35125 AC012441.2-201ENST00000444843 739 ntBASIC20.37■□□□□ 0.85
USP6P35125 AC073150.1-201ENST00000450406 1084 ntBASIC20.37■□□□□ 0.85
USP6P35125 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC20.37■□□□□ 0.85
USP6P35125 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6P35125 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC20.37■□□□□ 0.85
USP6P35125 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6P35125 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
USP6P35125 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6P35125 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC20.37■□□□□ 0.85
USP6P35125 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 AC020658.6-201ENST00000623564 1870 ntBASIC20.37■□□□□ 0.85
USP6P35125 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
USP6P35125 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
USP6P35125 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USP6P35125 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
USP6P35125 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 AC078875.1-201ENST00000431907 724 ntBASIC20.36■□□□□ 0.85
USP6P35125 AL353637.1-201ENST00000451571 732 ntBASIC20.36■□□□□ 0.85
USP6P35125 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC20.36■□□□□ 0.85
USP6P35125 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC20.36■□□□□ 0.85
USP6P35125 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP6P35125 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC20.36■□□□□ 0.85
USP6P35125 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
USP6P35125 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC20.36■□□□□ 0.85
USP6P35125 AC008805.1-201ENST00000590892 364 ntBASIC20.36■□□□□ 0.85
USP6P35125 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC20.36■□□□□ 0.85
USP6P35125 MEG3_2.1-201ENST00000611456 105 ntBASIC20.36■□□□□ 0.85
USP6P35125 MIR6720-201ENST00000611664 98 ntBASIC20.36■□□□□ 0.85
USP6P35125 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
USP6P35125 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.35■□□□□ 0.85
USP6P35125 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.35■□□□□ 0.85
USP6P35125 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms