Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL1P22362 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.24□□□□□ -0.29
CCL1P22362 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
CCL1P22362 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CCL1P22362 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CCL1P22362 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 AC093525.8-201ENST00000624099 1342 ntBASIC13.23□□□□□ -0.29
CCL1P22362 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL1P22362 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CCL1P22362 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.23□□□□□ -0.29
CCL1P22362 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.23□□□□□ -0.29
CCL1P22362 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.23□□□□□ -0.29
CCL1P22362 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
CCL1P22362 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
CCL1P22362 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CCL1P22362 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 AC063926.3-201ENST00000624734 5658 ntBASIC13.22□□□□□ -0.29
CCL1P22362 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CCL1P22362 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 BX640514.1-201ENST00000583223 1918 ntBASIC13.22□□□□□ -0.29
CCL1P22362 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.22□□□□□ -0.29
CCL1P22362 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL1P22362 TREML5P-201ENST00000421694 576 ntBASIC13.22□□□□□ -0.29
CCL1P22362 AC241585.1-201ENST00000433527 519 ntBASIC13.22□□□□□ -0.29
CCL1P22362 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 FAM86GP-201ENST00000448322 971 ntBASIC13.22□□□□□ -0.29
CCL1P22362 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.22□□□□□ -0.29
CCL1P22362 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CCL1P22362 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.22□□□□□ -0.29
CCL1P22362 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL1P22362 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.22□□□□□ -0.29
CCL1P22362 RPL28-205ENST00000558131 444 ntTSL 5 BASIC13.22□□□□□ -0.29
CCL1P22362 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms