Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 FUOM-202ENST00000368551 628 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 AL137013.1-201ENST00000432946 1228 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RAB4AP20338 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 KRT8P26-201ENST00000534154 1276 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.9□□□□□ -0.5
RAB4AP20338 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 AC091167.2-201ENST00000579581 588 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC11.9□□□□□ -0.5
RAB4AP20338 AP005901.3-202ENST00000581653 237 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 AC011498.5-201ENST00000592027 486 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 TMEM191A-211ENST00000637163 1067 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB4AP20338 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
RAB4AP20338 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 AL138709.1-201ENST00000614840 1693 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
RAB4AP20338 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 AGAP7P-201ENST00000582299 2062 ntBASIC11.9□□□□□ -0.51
RAB4AP20338 AGAP14-201ENST00000624701 2060 ntBASIC11.9□□□□□ -0.51
RAB4AP20338 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RAB4AP20338 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 AC005622.1-201ENST00000636801 1703 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
RAB4AP20338 MEX3B-202ENST00000558133 4333 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 BNIP3P1-202ENST00000550043 1585 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 AC092135.3-201ENST00000624151 1846 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RAB4AP20338 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
RAB4AP20338 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RAB4AP20338 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB4AP20338 AC092647.4-201ENST00000457211 535 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB4AP20338 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.89□□□□□ -0.51
RAB4AP20338 LINC01238-205ENST00000567549 1107 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 CYP2A7P1-201ENST00000595391 815 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 AC010331.1-201ENST00000611423 582 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 AC073592.4-201ENST00000623827 446 ntBASIC11.89□□□□□ -0.51
RAB4AP20338 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 GSN-209ENST00000449733 2702 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.89□□□□□ -0.51
RAB4AP20338 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RAB4AP20338 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.89□□□□□ -0.51
RAB4AP20338 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms