Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.67■□□□□ 0.1
NFKB1P19838 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 RN7SL399P-201ENST00000471648 279 ntBASIC15.67■□□□□ 0.1
NFKB1P19838 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NFKB1P19838 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.67■□□□□ 0.1
NFKB1P19838 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.67■□□□□ 0.1
NFKB1P19838 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NFKB1P19838 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.67■□□□□ 0.1
NFKB1P19838 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NFKB1P19838 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NFKB1P19838 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.66■□□□□ 0.1
NFKB1P19838 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 ACE3P-201ENST00000423435 1973 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
NFKB1P19838 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.66■□□□□ 0.1
NFKB1P19838 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NFKB1P19838 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.66■□□□□ 0.1
NFKB1P19838 GAPDHP40-201ENST00000505218 1006 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 SERBP1P5-201ENST00000510079 1181 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.66■□□□□ 0.1
NFKB1P19838 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.66■□□□□ 0.1
NFKB1P19838 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.66■□□□□ 0.1
NFKB1P19838 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.66■□□□□ 0.1
NFKB1P19838 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.66■□□□□ 0.1
NFKB1P19838 SAMD11P1-201ENST00000571429 661 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 AL049840.4-201ENST00000602422 811 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NFKB1P19838 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.66■□□□□ 0.1
NFKB1P19838 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.66■□□□□ 0.1
NFKB1P19838 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.66■□□□□ 0.1
NFKB1P19838 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.66■□□□□ 0.1
NFKB1P19838 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NFKB1P19838 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
NFKB1P19838 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
NFKB1P19838 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
NFKB1P19838 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.65■□□□□ 0.1
NFKB1P19838 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC15.65■□□□□ 0.1
NFKB1P19838 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
NFKB1P19838 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
NFKB1P19838 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms