Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
POLR2CP19387 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
POLR2CP19387 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2CP19387 GPR53P-205ENST00000457298 1084 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 GAPDHP40-201ENST00000505218 1006 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
POLR2CP19387 KRT17P8-201ENST00000540749 863 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 HILS1-202ENST00000545329 423 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2CP19387 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2CP19387 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2CP19387 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.94□□□□□ -0.02
POLR2CP19387 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 AL162274.1-201ENST00000617191 1098 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.94□□□□□ -0.02
POLR2CP19387 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 AC090616.6-203ENST00000579186 1945 ntBASIC14.94□□□□□ -0.02
POLR2CP19387 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.94□□□□□ -0.02
POLR2CP19387 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
POLR2CP19387 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 AL138799.1-201ENST00000448213 1675 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 PKD1P5-201ENST00000532415 10291 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
POLR2CP19387 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.93□□□□□ -0.02
POLR2CP19387 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 AC112492.5-201ENST00000421897 457 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.93□□□□□ -0.02
POLR2CP19387 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
POLR2CP19387 SLC25A47P1-201ENST00000531577 414 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.93□□□□□ -0.02
POLR2CP19387 PTP4A1P2-201ENST00000546033 454 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 AP001063.1-201ENST00000568332 529 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 AC063926.3-201ENST00000624734 5658 ntBASIC14.93□□□□□ -0.02
POLR2CP19387 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.93□□□□□ -0.02
POLR2CP19387 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
POLR2CP19387 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
POLR2CP19387 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms