Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.41■□□□□ 0.06
XRCC1P18887 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
XRCC1P18887 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.41■□□□□ 0.06
XRCC1P18887 HNRNPUP1-201ENST00000554987 333 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.41■□□□□ 0.06
XRCC1P18887 AC097359.3-201ENST00000603982 1210 ntBASIC15.41■□□□□ 0.06
XRCC1P18887 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
XRCC1P18887 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
XRCC1P18887 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
XRCC1P18887 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
XRCC1P18887 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.41■□□□□ 0.06
XRCC1P18887 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 AC232323.1-201ENST00000540724 2099 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 REXO1L5P-201ENST00000622260 2098 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 AL390755.1-201ENST00000623716 2027 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC1P18887 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 DGCR5-201ENST00000399539 862 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 AC005034.1-201ENST00000426657 489 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC1P18887 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.4■□□□□ 0.06
XRCC1P18887 AC239800.4-201ENST00000603712 296 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 AC093726.1-201ENST00000608064 963 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
XRCC1P18887 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
XRCC1P18887 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.4■□□□□ 0.06
XRCC1P18887 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.4■□□□□ 0.06
XRCC1P18887 AC013726.1-201ENST00000563747 2285 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 AC009090.5-201ENST00000624886 2285 ntBASIC15.4■□□□□ 0.06
XRCC1P18887 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
XRCC1P18887 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC1P18887 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
XRCC1P18887 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
XRCC1P18887 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.39■□□□□ 0.05
XRCC1P18887 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms