Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.36□□□□□ -0.11
PRKCAP17252 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.36□□□□□ -0.11
PRKCAP17252 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.36□□□□□ -0.11
PRKCAP17252 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.36□□□□□ -0.11
PRKCAP17252 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.36□□□□□ -0.11
PRKCAP17252 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 ZNF890P-202ENST00000530367 1156 ntBASIC14.36□□□□□ -0.11
PRKCAP17252 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.36□□□□□ -0.11
PRKCAP17252 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PRKCAP17252 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PRKCAP17252 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
PRKCAP17252 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.36□□□□□ -0.11
PRKCAP17252 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.36□□□□□ -0.11
PRKCAP17252 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PRKCAP17252 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 REXO1L2P-201ENST00000425429 2069 ntBASIC14.35□□□□□ -0.11
PRKCAP17252 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.35□□□□□ -0.11
PRKCAP17252 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 AC093214.1-201ENST00000511688 1107 ntBASIC14.35□□□□□ -0.11
PRKCAP17252 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.35□□□□□ -0.11
PRKCAP17252 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PRKCAP17252 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.35□□□□□ -0.11
PRKCAP17252 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PRKCAP17252 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.34□□□□□ -0.11
PRKCAP17252 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.34□□□□□ -0.11
PRKCAP17252 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.34□□□□□ -0.11
PRKCAP17252 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 AC092127.1-201ENST00000567093 3455 ntBASIC14.34□□□□□ -0.11
PRKCAP17252 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PRKCAP17252 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms