Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TARDBPP1-201ENST00000442013 1203 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 KRT18P3-201ENST00000451602 1288 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC105021.1-202ENST00000570572 669 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC015910.1-201ENST00000579400 975 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC027601.4-201ENST00000611259 610 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC055717.3-201ENST00000622967 595 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ST20-AS1-201ENST00000560255 4223 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HIST1H1DP16402 AC027601.5-201ENST00000624065 2482 ntBASIC13.11□□□□□ -0.31
HIST1H1DP16402 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
HIST1H1DP16402 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC097359.2-201ENST00000604992 2389 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 REXO1L4P-201ENST00000605109 1937 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC005840.4-201ENST00000541242 2494 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 SPDYE17-201ENST00000412399 783 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC069335.1-201ENST00000489972 472 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 AC140113.2-201ENST00000604370 208 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 FAM197Y3-203ENST00000618346 717 ntBASIC13.1□□□□□ -0.31
HIST1H1DP16402 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
HIST1H1DP16402 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
HIST1H1DP16402 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms