Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC130P13994 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC130P13994 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC130P13994 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC130P13994 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC130P13994 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 RNU1-114P-201ENST00000365297 166 ntBASIC16.29■□□□□ 0.2
CCDC130P13994 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC130P13994 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC130P13994 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 AC068587.3-201ENST00000526613 355 ntBASIC16.29■□□□□ 0.2
CCDC130P13994 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC130P13994 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC130P13994 AL645728.2-202ENST00000641679 227 ntBASIC16.29■□□□□ 0.2
CCDC130P13994 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC130P13994 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC130P13994 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC130P13994 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC130P13994 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC130P13994 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 AL158070.2-201ENST00000623713 1621 ntBASIC16.28■□□□□ 0.2
CCDC130P13994 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC130P13994 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC130P13994 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC130P13994 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC130P13994 AC009486.1-201ENST00000569860 813 ntBASIC16.28■□□□□ 0.2
CCDC130P13994 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC130P13994 AC015936.2-201ENST00000593177 259 ntBASIC16.28■□□□□ 0.2
CCDC130P13994 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC130P13994 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC130P13994 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC130P13994 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC130P13994 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCDC130P13994 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms