Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 C1QBPP1-201ENST00000400117 770 ntBASIC16.88■□□□□ 0.29
CLTAP09496 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CLTAP09496 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.88■□□□□ 0.29
CLTAP09496 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 GAPDHP40-201ENST00000505218 1006 ntBASIC16.88■□□□□ 0.29
CLTAP09496 ENPP7P5-201ENST00000541031 1031 ntBASIC16.88■□□□□ 0.29
CLTAP09496 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.88■□□□□ 0.29
CLTAP09496 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.88■□□□□ 0.29
CLTAP09496 AC239800.4-201ENST00000603712 296 ntBASIC16.88■□□□□ 0.29
CLTAP09496 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 AC025181.2-201ENST00000606994 802 ntBASIC16.88■□□□□ 0.29
CLTAP09496 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.88■□□□□ 0.29
CLTAP09496 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CLTAP09496 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CLTAP09496 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 AC073347.1-201ENST00000421633 2643 ntBASIC16.87■□□□□ 0.29
CLTAP09496 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 AC087481.3-201ENST00000602886 1894 ntBASIC16.87■□□□□ 0.29
CLTAP09496 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.87■□□□□ 0.29
CLTAP09496 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.87■□□□□ 0.29
CLTAP09496 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.87■□□□□ 0.29
CLTAP09496 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.87■□□□□ 0.29
CLTAP09496 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.87■□□□□ 0.29
CLTAP09496 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 AC132938.2-201ENST00000579188 680 ntBASIC16.87■□□□□ 0.29
CLTAP09496 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 AC093813.1-201ENST00000605066 256 ntBASIC16.87■□□□□ 0.29
CLTAP09496 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.87■□□□□ 0.29
CLTAP09496 IGHV3-72-202ENST00000621503 303 ntBASIC16.87■□□□□ 0.29
CLTAP09496 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 CU634019.7-201ENST00000624153 1185 ntBASIC16.87■□□□□ 0.29
CLTAP09496 FP236241.2-201ENST00000624906 1185 ntBASIC16.87■□□□□ 0.29
CLTAP09496 AL591163.1-201ENST00000641757 987 ntBASIC16.87■□□□□ 0.29
CLTAP09496 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
CLTAP09496 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
CLTAP09496 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 TMBIM7P-203ENST00000641617 1718 ntBASIC16.87■□□□□ 0.29
CLTAP09496 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.87■□□□□ 0.29
CLTAP09496 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
CLTAP09496 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.87■□□□□ 0.29
CLTAP09496 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CLTAP09496 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.86■□□□□ 0.29
CLTAP09496 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
CLTAP09496 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CLTAP09496 AL009178.2-201ENST00000597278 2719 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms