Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPM3P06753 AC152010.1-201ENST00000415779 2006 ntBASIC17.35■□□□□ 0.37
TPM3P06753 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.35■□□□□ 0.37
TPM3P06753 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TPM3P06753 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC17.35■□□□□ 0.37
TPM3P06753 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TPM3P06753 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC17.34■□□□□ 0.37
TPM3P06753 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.34■□□□□ 0.37
TPM3P06753 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.34■□□□□ 0.37
TPM3P06753 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.34■□□□□ 0.37
TPM3P06753 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TPM3P06753 AC011467.4-201ENST00000594891 528 ntBASIC17.34■□□□□ 0.37
TPM3P06753 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.34■□□□□ 0.37
TPM3P06753 AC026979.3-201ENST00000607315 403 ntBASIC17.34■□□□□ 0.37
TPM3P06753 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
TPM3P06753 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.34■□□□□ 0.37
TPM3P06753 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TPM3P06753 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPM3P06753 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPM3P06753 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.33■□□□□ 0.37
TPM3P06753 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TPM3P06753 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.33■□□□□ 0.37
TPM3P06753 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TPM3P06753 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC17.33■□□□□ 0.37
TPM3P06753 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
TPM3P06753 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.33■□□□□ 0.36
TPM3P06753 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.33■□□□□ 0.36
TPM3P06753 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.33■□□□□ 0.36
TPM3P06753 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.33■□□□□ 0.36
TPM3P06753 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.33■□□□□ 0.36
TPM3P06753 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.33■□□□□ 0.36
TPM3P06753 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TPM3P06753 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 AL049840.3-201ENST00000602669 611 ntBASIC17.33■□□□□ 0.36
TPM3P06753 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TPM3P06753 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.33■□□□□ 0.36
TPM3P06753 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TPM3P06753 AL136982.4-201ENST00000437689 1740 ntBASIC17.33■□□□□ 0.36
TPM3P06753 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 AC079781.5-202ENST00000641784 3743 ntBASIC17.32■□□□□ 0.36
TPM3P06753 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.32■□□□□ 0.36
TPM3P06753 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPM3P06753 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TPM3P06753 EEF1DP4-201ENST00000446006 880 ntBASIC17.32■□□□□ 0.36
TPM3P06753 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.32■□□□□ 0.36
TPM3P06753 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.32■□□□□ 0.36
TPM3P06753 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms