Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.9■□□□□ 0.3
CD4P01730 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.9■□□□□ 0.3
CD4P01730 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD4P01730 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 AL008707.1-201ENST00000422498 534 ntBASIC16.9■□□□□ 0.3
CD4P01730 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 EIF3FP3-201ENST00000434851 1086 ntBASIC16.9■□□□□ 0.3
CD4P01730 CHMP1AP1-201ENST00000445563 662 ntBASIC16.9■□□□□ 0.3
CD4P01730 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.9■□□□□ 0.3
CD4P01730 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.9■□□□□ 0.3
CD4P01730 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.9■□□□□ 0.3
CD4P01730 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD4P01730 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 AC008894.3-201ENST00000624324 3103 ntBASIC16.9■□□□□ 0.3
CD4P01730 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD4P01730 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.9■□□□□ 0.3
CD4P01730 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CD4P01730 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
CD4P01730 DOC2GP-204ENST00000639052 2548 ntBASIC16.9■□□□□ 0.3
CD4P01730 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CD4P01730 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD4P01730 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD4P01730 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.89■□□□□ 0.3
CD4P01730 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD4P01730 AC011270.2-201ENST00000624293 2550 ntBASIC16.89■□□□□ 0.3
CD4P01730 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD4P01730 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.89■□□□□ 0.29
CD4P01730 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 AC022188.1-201ENST00000620960 1664 ntBASIC16.89■□□□□ 0.29
CD4P01730 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 MIR33B-201ENST00000385104 96 ntBASIC16.89■□□□□ 0.29
CD4P01730 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.89■□□□□ 0.29
CD4P01730 AL354877.1-201ENST00000424412 413 ntBASIC16.89■□□□□ 0.29
CD4P01730 AC253536.4-201ENST00000440539 267 ntBASIC16.89■□□□□ 0.29
CD4P01730 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 AC022217.1-201ENST00000521069 738 ntBASIC16.89■□□□□ 0.29
CD4P01730 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.89■□□□□ 0.29
CD4P01730 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.89■□□□□ 0.29
CD4P01730 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 OR10B1P-201ENST00000601666 907 ntBASIC16.89■□□□□ 0.29
CD4P01730 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CD4P01730 AP001002.3-201ENST00000623482 206 ntBASIC16.89■□□□□ 0.29
CD4P01730 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.89■□□□□ 0.29
CD4P01730 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.89■□□□□ 0.29
CD4P01730 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CD4P01730 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
CD4P01730 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD4P01730 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.88■□□□□ 0.29
CD4P01730 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.88■□□□□ 0.29
CD4P01730 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.88■□□□□ 0.29
CD4P01730 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD4P01730 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CD4P01730 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.88■□□□□ 0.29
CD4P01730 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.88■□□□□ 0.29
CD4P01730 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms