Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
CNOT4O95628 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 AC079776.1-201ENST00000401540 1152 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 RPL5P21-201ENST00000404620 815 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.75□□□□□ -0.21
CNOT4O95628 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 AC112492.5-201ENST00000421897 457 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 AL162726.2-201ENST00000438986 1017 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC106886.1-201ENST00000568660 600 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 AL645728.2-202ENST00000641679 227 ntBASIC13.75□□□□□ -0.21
CNOT4O95628 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.75□□□□□ -0.21
CNOT4O95628 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.75□□□□□ -0.21
CNOT4O95628 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CNOT4O95628 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CNOT4O95628 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 AP005117.1-202ENST00000581724 1908 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 AC134915.1-201ENST00000426461 574 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 WASH4P-201ENST00000564273 1246 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.74□□□□□ -0.21
CNOT4O95628 AC093813.1-201ENST00000605066 256 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
CNOT4O95628 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 INTS4P2-202ENST00000614726 2019 ntBASIC13.74□□□□□ -0.21
CNOT4O95628 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
CNOT4O95628 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CNOT4O95628 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CNOT4O95628 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CNOT4O95628 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms