Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
SIX6O95475 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.96□□□□□ -0.34
SIX6O95475 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SIX6O95475 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 AP000845.1-201ENST00000581677 2131 ntBASIC12.95□□□□□ -0.34
SIX6O95475 DMBT1P1-203ENST00000636837 4628 ntBASIC12.95□□□□□ -0.34
SIX6O95475 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 AC018442.1-201ENST00000421439 2061 ntBASIC12.95□□□□□ -0.34
SIX6O95475 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.95□□□□□ -0.34
SIX6O95475 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 AC132008.2-207ENST00000454517 770 ntBASIC12.95□□□□□ -0.34
SIX6O95475 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC12.95□□□□□ -0.34
SIX6O95475 AL136038.3-201ENST00000561909 1096 ntBASIC12.95□□□□□ -0.34
SIX6O95475 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 AP006294.2-201ENST00000641667 209 ntBASIC12.95□□□□□ -0.34
SIX6O95475 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.95□□□□□ -0.34
SIX6O95475 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SIX6O95475 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SIX6O95475 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SIX6O95475 AL731571.1-201ENST00000617058 5428 ntBASIC12.95□□□□□ -0.34
SIX6O95475 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 AC083964.2-201ENST00000623988 2396 ntBASIC12.94□□□□□ -0.34
SIX6O95475 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 AC023090.2-201ENST00000625182 2110 ntBASIC12.94□□□□□ -0.34
SIX6O95475 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 AC005521.1-201ENST00000393351 872 ntBASIC12.94□□□□□ -0.34
SIX6O95475 HMGA1P7-201ENST00000406908 502 ntBASIC12.94□□□□□ -0.34
SIX6O95475 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC12.94□□□□□ -0.34
SIX6O95475 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
SIX6O95475 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.94□□□□□ -0.34
SIX6O95475 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.94□□□□□ -0.34
SIX6O95475 AC243562.2-201ENST00000561247 970 ntBASIC12.94□□□□□ -0.34
SIX6O95475 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SIX6O95475 MIR4515-201ENST00000584082 81 ntBASIC12.94□□□□□ -0.34
SIX6O95475 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.94□□□□□ -0.34
SIX6O95475 AC069148.1-201ENST00000608741 768 ntBASIC12.94□□□□□ -0.34
SIX6O95475 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 AL139288.1-201ENST00000623748 933 ntBASIC12.94□□□□□ -0.34
SIX6O95475 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SIX6O95475 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SIX6O95475 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms