Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.64□□□□□ -0.23
KDM4BO94953 AC148477.4-201ENST00000613430 1793 ntBASIC13.64□□□□□ -0.23
KDM4BO94953 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 AC142381.1-201ENST00000426099 345 ntBASIC13.64□□□□□ -0.23
KDM4BO94953 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.64□□□□□ -0.23
KDM4BO94953 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.64□□□□□ -0.23
KDM4BO94953 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.64□□□□□ -0.23
KDM4BO94953 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 AC092902.6-201ENST00000641783 218 ntBASIC13.64□□□□□ -0.23
KDM4BO94953 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.64□□□□□ -0.23
KDM4BO94953 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
KDM4BO94953 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
KDM4BO94953 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.64□□□□□ -0.23
KDM4BO94953 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
KDM4BO94953 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
KDM4BO94953 AC041040.2-201ENST00000622926 2899 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 AJ011931.1-201ENST00000618749 2492 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.63□□□□□ -0.23
KDM4BO94953 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 ADH5P3-201ENST00000433842 1137 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 FAM58CP-201ENST00000435741 640 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 MIR4313-201ENST00000580760 101 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
KDM4BO94953 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
KDM4BO94953 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 AL691432.1-201ENST00000596308 1422 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 AL359183.1-201ENST00000623796 2132 ntBASIC13.63□□□□□ -0.23
KDM4BO94953 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
KDM4BO94953 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.62□□□□□ -0.23
KDM4BO94953 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.62□□□□□ -0.23
KDM4BO94953 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.62□□□□□ -0.23
KDM4BO94953 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
KDM4BO94953 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KDM4BO94953 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.62□□□□□ -0.23
KDM4BO94953 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms